Birs- 19w5226: The Topology of Nucleic Acids: Research at the Interface of Low-Dimensional Topology, Polymer Physics and Molecular Biology

  1. Title:
    Scientific Applications of Topology
    Speaker:
    De Witt Sumners

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903250902-Sumners.html

  2. Title:
    Untangling twisted DNA, one molecule at a time
    Speaker:
    Alice Pyne

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903250931-Pyne.html

  3. Title:
    Thoughts on lattice knot statistics
    Speaker:
    Esaias J Janse van Rensburg

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903251031-JansevanRensburg.html

  4. Title:
    New questions for knot diagrams
    Speaker:
    Harrison Chapman

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903251402-Chapman.html

  5. Title:
    Contributions of nucleotide sequence and Lac repressor geometry to DNA looping events
    Speaker:
    Wilma Olson

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903251433-Olson.html

  6. Title:
    A Dynamic E. coli Genome: Widespread DNA Contacts Revealed by Monitoring Mu Transposition.
    Speaker:
    Rasika Harshey

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903260901-Harshey.html

  7. Title:
    Recent advances in the Monte Carlo sampling of polymer configurations
    Speaker:
    Nathan Clisby

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903260937-Clisby.html

  8. Title:
    Models of Polymer Physics for the 3D Structure of Chromosomes
    Speaker:
    Mario Nicodemi

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903261033-Nicodemi.html

  9. Title:
    Geometric measures of knots in extreme confinement
    Speaker:
    Uta Ziegler

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903261109-Ziegler.html

  10. Title:
    Knotting statistics for polygons in lattice tubes
    Speaker:
    Nicholas Beaton

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903261138-Beaton.html

  11. Title:
    TDA and machine learning approaches to the colored Jones polynomial
    Speaker:
    Radmila Sazdanovic

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903261335-Sazdanovic.html

  12. Title:
    Braid Index Bounds Ropelength From Below
    Speaker:
    Yuanan Diao

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903261406-Diao.html

  13. Title:
    3-dimensional topology and polycontinuous pattern
    Speaker:
    Koya Shimokawa

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903262008-Shimokawa.html

  14. Title:
    Role of DNA Topology in Biological Machines and Evolutionarily Related Biological Functions: Chemical Chirality in Site-Specific DNA Recombination
    Speaker:
    Makkuni Jayaram

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903270901-Jayaram.html

  15. Title:
    Site-specific recombination and the band surgery along knots
    Speaker:
    Allison Moore

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903270935-Moore.html

  16. Title:
    First steps of unlinking pathways
    Speaker:
    Kai Ishihara

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903271033-Ishihara.html

  17. Title:
    When can a link be obtained from another using crossing exchanges and smoothings?
    Speaker:
    Carolina Medina Graciano

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903271108-MedinaGraciano.html

  18. Title:
    Topological modeling of reconnections
    Speaker:
    Mariel Vazquez

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903271130-Vazquez.html

  19. Title:
    Kinetic Pathways of Topology Simplification by Type-II Topoisomerases in Knotted Supercoiled DNA
    Speaker:
    Stephen Levene

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903280901-Levene.html

  20. Title:
    Modelling DNA under protein-binding, stretching and torsional stress
    Speaker:
    Agnes Noy

    Link:
    http://www.birs.ca/events/2019/5-day-workshops/19w5226/videos/watch/201903280939-Noy.html