Birs- 24w5267: The Crossroads of Topology, Combinatorics and Biosciences

  1. Title:
    Topology, Chirality and Symmetry from Primary to Quaternary Structure in DNA Lattices

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  2. Title:
    Knotty problems in DNA origami scaffold routing

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  3. Title:
    Application of band surgery on knots and links

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  4. Title:
    “Cracking” the secondary codes; how supercoiling, looping, and counterions control access to the primary code of DNA

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  5. Title:
    TORC: Using Superhelicity as a control mechanism in Plasmids

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  6. Title:
    Topology and geometry of collections of biopolymers

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  7. Title:
    On a barrier height problem for RNA branching

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  8. Title:
    High-resolution single-molecule investigations reveal new insights into the R-loop energetics landscapes

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  9. Title:
    Phase transitions in the nucleus of cells shape chromosome folding and function

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  10. Title:
    Extreme Environments Leave Mathematical Imprints in Genomes

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  11. Title:
    The bacteriophage as a model system to study double stranded DNA under spatial confinement

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  12. Title:
    Topological Bonded Knots and Knotoids

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  13. Title:
    Modeling DNA in nanochannels as links in lattice tubes

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  14. Title:
    Unknotting operations and invariants of trivalent spatial graphs

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  15. Title:
    One more attempt at topology preserving pivots

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  16. Title:
    Optimizing a Lattice Polygon Polymer Model Using Stochastic Approximation

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  17. Title:
    Tacking Topology with TopoStats

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  18. Title:
    Understanding R-loop formation with tree polynomial representations of RNA secondary structures

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  19. Title:
    Dynamics of DNA trefoil knots with intrinsic excess twist

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  20. Title:
    ROAD to Unknotted RNA: Designing Co-Transcriptional Folds

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