Birs- 17w5131: Statistical and Computational Challenges in Large Scale Molecular Biology

  1. Title:
    Large scale machine learning tutorial

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  2. Title:
    QRank: A novel quantile regression tool for eQTL discovery

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  3. Title:
    Representing Genetic Determinants in Bacterial GWAS with Compacted De Bruijn Graphs

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    Post hoc inference for multiple testing

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  5. Title:
    Inferring function from constrained coding regions in the human genome

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  6. Title:
    Systematic Discovery of Conservation States for Single-Nucleotide Annotation of the Human Genome

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  7. Title:
    Brain region-specific DNA methylation and chromatin accessibility

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  8. Title:
    Longitudinal study of gene expression in a Swedish population sample

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  9. Title:
    Impact of regulatory variation across human iPSCs and differentiated cells

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  10. Title:
    Investigating the source and function of most of the genome: endogenous retroelements and the proteins that bind them

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  11. Title:
    Delineating the mode and tempo of human tumor evolution

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  12. Title:
    Studying the 3D structure of the P falciparum's genome by modeling contact counts as random Negative Binomial variables

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  13. Title:
    Algorithms for Inferring Evolution and Migration of Tumors

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  14. Title:
    Cancer stratification from mutation profiles

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  15. Title:
    The links between DNA variation and complex traits

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  16. Title:
    Bayesian matrix factorization with side information and application to drug-target activity prediction and gene prioritization

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  17. Title:
    Heritability estimation in high-dimensional sparse linear mixed models

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  18. Title:
    Mediation analysis, multi-tissue factor QTLs, EHRs, transfer learning in deep CNNs for genetics

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  19. Title:
    The major determinants of genome-wide splicing efficiency in flies

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  20. Title:
    Towards automated population genetic inference using deep neural networks

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