Birs- 23w5090: Single-Cell Plus - Data Science Challenges in Single-Cell Research

  1. Title:
    Statistical challenges in Single-Cell RNA-Seq and spatial transcriptomics

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  2. Title:
    Spatial Deconvolution Method Considering Platform Effect Removal, Sparsity and Spatial Information

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  3. Title:
    SpatialScope: A unified approach for integrating spatial and single-cell transcriptomics data using deep generative models

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  4. Title:
    Biologically-informed self-supervised learning for segmentation of subcellular spatial transcriptomics data

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  5. Title:
    Rethinking assumptions in spatial molecular data analysis: the role and impact of library size normalisation

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  6. Title:
    Discussion

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  7. Title:
    Gene set tests and cell-cell communication in scRNA-seq data

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  8. Title:
    Identifying changes in cell states related to their spatial context in tissue microenvironment

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  9. Title:
    Scalable analysis methods for single cell omics data and lineage tracing

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  10. Title:
    Graphical generative model for identification of disease associated perturbations to intercellular communications in single-cell RNA sequencing data

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  11. Title:
    Cross-species single-cell atlases: analysis and challenges

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  12. Title:
    An informatics framework for assembling human cell atlases as a digital life

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  13. Title:
    Delineate the regulatory map in silico

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